IL_4LFZ_375

3D structure

PDB id

4LFZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.92 Å

Loop

Sequence

CGU*AGUG

Length

7 nucleotides

Bulged bases

4LFZ|1|YA|G|1248

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LFZ_375 not in the Motif Atlas

Homologous match to IL_9DFE_044

Geometric discrepancy: 0.1298

The information below is about IL_9DFE_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42997.3

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

20

Unit IDs

4LFZ|1|YA|C|1196
4LFZ|1|YA|G|1197
4LFZ|1|YA|U|1198
*
4LFZ|1|YA|A|1247
4LFZ|1|YA|G|1248
4LFZ|1|YA|U|1249
4LFZ|1|YA|G|1250

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YF

50S ribosomal protein L4

Chain YP

50S ribosomal protein L15

Chain YU

50S ribosomal protein L20