IL_4LFZ_376
3D structure
- PDB id
- 4LFZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.92 Å
Loop
- Sequence
- UGAAGC*GCGUAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4LFZ_376 not in the Motif Atlas
- Geometric match to IL_3LQX_002
- Geometric discrepancy: 0.3217
- The information below is about IL_3LQX_002
- Detailed Annotation
- tSH-tHW-tHS-cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_76308.6
- Basepair signature
- cWW-tSH-tHW-tHS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
4LFZ|1|YA|U|1357
4LFZ|1|YA|G|1358
4LFZ|1|YA|A|1359
4LFZ|1|YA|A|1360
4LFZ|1|YA|G|1361
4LFZ|1|YA|C|1362
*
4LFZ|1|YA|G|1369
4LFZ|1|YA|C|1370
4LFZ|1|YA|G|1371
4LFZ|1|YA|U|1372
4LFZ|1|YA|A|1373
4LFZ|1|YA|G|1374
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y1
- 50S ribosomal protein L28
- Chain Y7
- 50S ribosomal protein L34
- Chain YD
- 50S ribosomal protein L2
Coloring options: