IL_4LNT_056

3D structure

PDB id

4LNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.94 Å

Loop

Sequence

GGAG*UGAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LNT_056 not in the Motif Atlas

Homologous match to IL_5J7L_062

Geometric discrepancy: 0.1208

The information below is about IL_5J7L_062

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.14

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

36

Unit IDs

4LNT|1|QA|G|1416
4LNT|1|QA|G|1417
4LNT|1|QA|A|1418
4LNT|1|QA|G|1419
*
4LNT|1|QA|U|1481
4LNT|1|QA|G|1482
4LNT|1|QA|A|1483
4LNT|1|QA|C|1484

Current chains

Chain QA

16S rRNA

Nearby chains

Chain RA

Large subunit ribosomal RNA; LSU rRNA