IL_4LNT_085

3D structure

PDB id

4LNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.94 Å

Loop

Sequence

CUGAC*GGUG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LNT_085 not in the Motif Atlas

Homologous match to IL_7RQB_026

Geometric discrepancy: 0.1313

The information below is about IL_7RQB_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_94165.1

Basepair signature

cWW-L-R-L-tHS-cWW

Number of instances in this motif group

1

Unit IDs

4LNT|1|RA|C|846
4LNT|1|RA|U|847
4LNT|1|RA|G|848
4LNT|1|RA|A|849
4LNT|1|RA|C|850
*
4LNT|1|RA|G|928
4LNT|1|RA|G|929
4LNT|1|RA|U|930
4LNT|1|RA|G|931

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R3

50S ribosomal protein L30