3D structure

PDB id
4LNT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
2.94 Å

Loop

Sequence
GG*CAC
Length
5 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4LNT_150 not in the Motif Atlas
Homologous match to IL_7RQB_092
Geometric discrepancy: 0.076
The information below is about IL_7RQB_092
Detailed Annotation
Major groove platform
Broad Annotation
No text annotation
Motif group
IL_27635.3
Basepair signature
cWW-cSH-cWW
Number of instances in this motif group
38

Unit IDs

4LNT|1|RA|G|2454
4LNT|1|RA|G|2455
*
4LNT|1|RA|C|2496
4LNT|1|RA|A|2497
4LNT|1|RA|C|2498

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R0
50S ribosomal protein L27
Chain RE
50S ribosomal protein L3
Chain RQ
50S ribosomal protein L16

Coloring options:


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