IL_4LNT_190

3D structure

PDB id

4LNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.94 Å

Loop

Sequence

GGAAGAAG*UGUAAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LNT_190 not in the Motif Atlas

Homologous match to IL_4LFB_017

Geometric discrepancy: 0.1099

The information below is about IL_4LFB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28026.3

Basepair signature

cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW

Number of instances in this motif group

2

Unit IDs

4LNT|1|XA|G|409
4LNT|1|XA|G|410
4LNT|1|XA|A|411
4LNT|1|XA|A|412
4LNT|1|XA|G|413
4LNT|1|XA|A|414
4LNT|1|XA|A|415
4LNT|1|XA|G|416
*
4LNT|1|XA|U|427
4LNT|1|XA|G|428
4LNT|1|XA|U|429
4LNT|1|XA|A|430
4LNT|1|XA|A|431
4LNT|1|XA|A|432
4LNT|1|XA|C|433

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XD

30S ribosomal protein S4