3D structure

PDB id
4LNT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
2.94 Å

Loop

Sequence
GA*UAC
Length
5 nucleotides
Bulged bases
4LNT|1|XA|A|1394
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4LNT_208 not in the Motif Atlas
Homologous match to IL_5J7L_039
Geometric discrepancy: 0.0578
The information below is about IL_5J7L_039
Detailed Annotation
Single bulged A
Broad Annotation
No text annotation
Motif group
IL_31462.5
Basepair signature
cWW-L-cWW
Number of instances in this motif group
129

Unit IDs

4LNT|1|XA|G|922
4LNT|1|XA|A|923
*
4LNT|1|XA|U|1393
4LNT|1|XA|A|1394
4LNT|1|XA|C|1395

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XE
30S ribosomal protein S5

Coloring options:


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