IL_4LNT_225

3D structure

PDB id

4LNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.94 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

4LNT|1|XA|C|1400, 4LNT|1|XA|A|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LNT_225 not in the Motif Atlas

Homologous match to IL_4LFB_056

Geometric discrepancy: 0.0912

The information below is about IL_4LFB_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

4LNT|1|XA|C|1399
4LNT|1|XA|C|1400
4LNT|1|XA|G|1401
*
4LNT|1|XA|C|1501
4LNT|1|XA|A|1502
4LNT|1|XA|A|1503
4LNT|1|XA|G|1504

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XV

Transfer RNA; tRNA

Chain XX

A-site ASL SufA6