IL_4LNT_241

3D structure

PDB id

4LNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.94 Å

Loop

Sequence

GC*GUC

Length

5 nucleotides

Bulged bases

4LNT|1|YA|U|270|||O

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LNT_241 not in the Motif Atlas

Geometric match to IL_7RQB_008

Geometric discrepancy: 0.2344

The information below is about IL_7RQB_008

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_83039.16

Basepair signature

cWW-L-cWW

Number of instances in this motif group

116

Unit IDs

4LNT|1|YA|G|270|||J
4LNT|1|YA|C|270|||K
*
4LNT|1|YA|G|270|||N
4LNT|1|YA|U|270|||O
4LNT|1|YA|C|270|||P

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y1

50S ribosomal protein L28

Chain YI

50S ribosomal protein L9