IL_4LSK_017

3D structure

PDB id

4LSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.48 Å

Loop

Sequence

GGAAGAAG*UGUAAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LSK_017 not in the Motif Atlas

Homologous match to IL_4LFB_017

Geometric discrepancy: 0.114

The information below is about IL_4LFB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28026.3

Basepair signature

cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW

Number of instances in this motif group

2

Unit IDs

4LSK|1|QA|G|409
4LSK|1|QA|G|410
4LSK|1|QA|A|411
4LSK|1|QA|A|412
4LSK|1|QA|G|413
4LSK|1|QA|A|414
4LSK|1|QA|A|415
4LSK|1|QA|G|416
*
4LSK|1|QA|U|427
4LSK|1|QA|G|428
4LSK|1|QA|U|429
4LSK|1|QA|A|430
4LSK|1|QA|A|431
4LSK|1|QA|A|432
4LSK|1|QA|C|433

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QD

30S ribosomal protein S4