IL_4LSK_090

3D structure

PDB id

4LSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.48 Å

Loop

Sequence

GG*UAC

Length

5 nucleotides

Bulged bases

4LSK|1|RA|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LSK_090 not in the Motif Atlas

Geometric match to IL_4V9F_098

Geometric discrepancy: 0.3213

The information below is about IL_4V9F_098

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

130

Unit IDs

4LSK|1|RA|G|880
4LSK|1|RA|G|881
*
4LSK|1|RA|U|895
4LSK|1|RA|A|896
4LSK|1|RA|C|897

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RZ

50S ribosomal protein L25