3D structure

PDB id
4LSK (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.48 Å

Loop

Sequence
UUC*GA
Length
5 nucleotides
Bulged bases
4LSK|1|XA|U|368
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4LSK_186 not in the Motif Atlas
Geometric match to IL_4LFB_014
Geometric discrepancy: 0.0771
The information below is about IL_4LFB_014
Detailed Annotation
Single bulged U
Broad Annotation
No text annotation
Motif group
IL_89505.4
Basepair signature
cWW-L-cWW
Number of instances in this motif group
117

Unit IDs

4LSK|1|XA|U|367
4LSK|1|XA|U|368
4LSK|1|XA|C|369
*
4LSK|1|XA|G|392
4LSK|1|XA|A|393

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XP
30S ribosomal protein S16

Coloring options:


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