IL_4LSK_188

3D structure

PDB id

4LSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.48 Å

Loop

Sequence

UG*UGA

Length

5 nucleotides

Bulged bases

4LSK|1|XA|G|388

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LSK_188 not in the Motif Atlas

Geometric match to IL_4LFB_016

Geometric discrepancy: 0.1734

The information below is about IL_4LFB_016

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.13

Basepair signature

cWW-L-cWW

Number of instances in this motif group

49

Unit IDs

4LSK|1|XA|U|375
4LSK|1|XA|G|376
*
4LSK|1|XA|U|387
4LSK|1|XA|G|388
4LSK|1|XA|A|389

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XP

30S ribosomal protein S16