3D structure

PDB id
4LSK (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.48 Å

Loop

Sequence
GGAGC*GCGCCGGUGAAAUAC
Length
20 nucleotides
Bulged bases
4LSK|1|YA|U|2167
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4LSK|1|YA|G|2124
4LSK|1|YA|G|2125
4LSK|1|YA|A|2126
4LSK|1|YA|G|2127
4LSK|1|YA|C|2128
*
4LSK|1|YA|G|2160
4LSK|1|YA|C|2161
4LSK|1|YA|G|2162
4LSK|1|YA|C|2163
4LSK|1|YA|C|2164
4LSK|1|YA|G|2165
4LSK|1|YA|G|2166
4LSK|1|YA|U|2167
4LSK|1|YA|G|2168
4LSK|1|YA|A|2169
4LSK|1|YA|A|2170
4LSK|1|YA|A|2171
4LSK|1|YA|U|2172
4LSK|1|YA|A|2173
4LSK|1|YA|C|2174

Current chains

Chain YA
23S rRNA

Nearby chains

Chain QA
Small subunit ribosomal RNA; SSU rRNA

Coloring options:

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