IL_4LSK_346

3D structure

PDB id

4LSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.48 Å

Loop

Sequence

GACAACC*GGCUAAUC

Length

15 nucleotides

Bulged bases

4LSK|1|QA|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LSK_346 not in the Motif Atlas

Homologous match to IL_6CZR_121

Geometric discrepancy: 0.1613

The information below is about IL_6CZR_121

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_80604.5

Basepair signature

cWW-L-R-tWH-tWH-tHW-L-R-cWW

Number of instances in this motif group

4

Unit IDs

4LSK|1|QA|G|148
4LSK|1|QA|A|149
4LSK|1|QA|C|150
4LSK|1|QA|A|151
4LSK|1|QA|A|152
4LSK|1|QA|C|153
4LSK|1|QA|C|154
*
4LSK|1|QA|G|167
4LSK|1|QA|G|168
4LSK|1|QA|C|169
4LSK|1|QA|U|170
4LSK|1|QA|A|171
4LSK|1|QA|A|172
4LSK|1|QA|U|173
4LSK|1|QA|C|174

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QT

30S ribosomal protein S20