IL_4LSK_351

3D structure

PDB id

4LSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.48 Å

Loop

Sequence

CAGC*GG

Length

6 nucleotides

Bulged bases

4LSK|1|QA|A|1130

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LSK_351 not in the Motif Atlas

Geometric match to IL_5W1H_001

Geometric discrepancy: 0.3556

The information below is about IL_5W1H_001

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.4

Basepair signature

cWW-cWW

Number of instances in this motif group

30

Unit IDs

4LSK|1|QA|C|1129
4LSK|1|QA|A|1130
4LSK|1|QA|G|1131
4LSK|1|QA|C|1132
*
4LSK|1|QA|G|1142
4LSK|1|QA|G|1143

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QI

30S ribosomal protein S9