3D structure

PDB id
4LT8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.14 Å

Loop

Sequence
CUGAC*GGUG
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4LT8_259 not in the Motif Atlas
Homologous match to IL_7RQB_026
Geometric discrepancy: 0.1234
The information below is about IL_7RQB_026
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_94165.1
Basepair signature
cWW-L-R-L-tHS-cWW
Number of instances in this motif group
1

Unit IDs

4LT8|1|YA|C|846
4LT8|1|YA|U|847
4LT8|1|YA|G|848
4LT8|1|YA|A|849
4LT8|1|YA|C|850
*
4LT8|1|YA|G|928
4LT8|1|YA|G|929
4LT8|1|YA|U|930
4LT8|1|YA|G|931

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y3
50S ribosomal protein L29

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.324 s