IL_4LT8_300

3D structure

PDB id

4LT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

4LT8|1|YA|G|1699

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LT8_300 not in the Motif Atlas

Geometric match to IL_7RQB_068

Geometric discrepancy: 0.1067

The information below is about IL_7RQB_068

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_65969.2

Basepair signature

cWW-tSH-tSH-tHH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

4LT8|1|YA|C|1686
4LT8|1|YA|G|1687
4LT8|1|YA|U|1688
4LT8|1|YA|A|1689
4LT8|1|YA|A|1690
4LT8|1|YA|C|1691
*
4LT8|1|YA|G|1696
4LT8|1|YA|G|1697
4LT8|1|YA|A|1698
4LT8|1|YA|G|1699
4LT8|1|YA|A|1700
4LT8|1|YA|A|1701
4LT8|1|YA|G|1702

Current chains

Chain YA

23S rRNA

Nearby chains

Chain XA

Small subunit ribosomal RNA; SSU rRNA

Chain YD

50S ribosomal protein L2