IL_4LVV_002

3D structure

PDB id

4LVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the THF riboswitch

Experimental method

X-RAY DIFFRACTION

Resolution

2.1 Å

Loop

Sequence

GC*GGU

Length

5 nucleotides

Bulged bases

4LVV|1|A|G|68

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LVV_002 not in the Motif Atlas

Geometric match to IL_3SUX_001

Geometric discrepancy: 0.0714

The information below is about IL_3SUX_001

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

76

Unit IDs

4LVV|1|A|G|17
4LVV|1|A|C|18
*
4LVV|1|A|G|67
4LVV|1|A|G|68
4LVV|1|A|U|69

Current chains

Chain A

THF riboswitch

Nearby chains