IL_4MCF_003

3D structure

PDB id

4MCF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Gas5 GRE Mimic

Experimental method

X-RAY DIFFRACTION

Resolution

1.9 Å

Loop

Sequence

CAG*CCU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_62295.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

400

Unit IDs

4MCF|1|G|C|1||||2_445
4MCF|1|G|A|2||||2_445
4MCF|1|G|G|3||||2_445
*
4MCF|1|H|C|8||||2_445
4MCF|1|H|C|9||||2_445
4MCF|1|H|U|10||||2_445

Current chains

Chain G

Gas5 GREM Fwd

Chain H

Gas5 GREM Rev

Nearby chains

Chain F

Gas5 GREM Rev