IL_4NVV_015
3D structure
- PDB id
- 4NVV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GAAC*GAGUGAAAUAGAGC
- Length
- 18 nucleotides
- Bulged bases
- 4NVV|1|A|U|529, 4NVV|1|A|G|533
- QA status
- QA data not found
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_02359.5
- Basepair signature
- cWW-tSS-tHH-cSW-bif-tSH-tWH-R-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
4NVV|1|A|G|507
4NVV|1|A|A|508
4NVV|1|A|A|509
4NVV|1|A|C|510
*
4NVV|1|A|G|521
4NVV|1|A|A|522
4NVV|1|A|G|523
4NVV|1|A|U|524
4NVV|1|A|G|525
4NVV|1|A|A|526
4NVV|1|A|A|527
4NVV|1|A|A|528
4NVV|1|A|U|529
4NVV|1|A|A|530
4NVV|1|A|G|531
4NVV|1|A|A|532
4NVV|1|A|G|533
4NVV|1|A|C|534
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain W
- 50S Ribosomal Protein L22
- Chain Y
- 50S Ribosomal Protein L24
Coloring options: