IL_4NVV_048
3D structure
- PDB id
- 4NVV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AUGAGUAA*UGAAAUU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- QA data not found
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_85647.5
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
4NVV|1|A|A|1308
4NVV|1|A|U|1309
4NVV|1|A|G|1310
4NVV|1|A|A|1311
4NVV|1|A|G|1312
4NVV|1|A|U|1313
4NVV|1|A|A|1314
4NVV|1|A|A|1315
*
4NVV|1|A|U|2033
4NVV|1|A|G|2034
4NVV|1|A|A|2035
4NVV|1|A|A|2036
4NVV|1|A|A|2037
4NVV|1|A|U|2038
4NVV|1|A|U|2039
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 5
- 50S Ribosomal Protein L32
- Chain F
- 50S Ribosomal Protein L4
- Chain W
- 50S Ribosomal Protein L22
Coloring options: