IL_4NVV_052

3D structure

PDB id

4NVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UGAAG*CGUAG

Length

10 nucleotides

Bulged bases

None detected

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_24982.7

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

17

Unit IDs

4NVV|1|A|U|1403
4NVV|1|A|G|1404
4NVV|1|A|A|1405
4NVV|1|A|A|1406
4NVV|1|A|G|1407
*
4NVV|1|A|C|1416
4NVV|1|A|G|1417
4NVV|1|A|U|1418
4NVV|1|A|A|1419
4NVV|1|A|G|1420

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 1

50S Ribosomal Protein L28

Chain 7

50S Ribosomal Protein L34

Chain D

50S Ribosomal Protein L2