IL_4NVV_059

3D structure

PDB id

4NVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AGAAG*UGGU

Length

9 nucleotides

Bulged bases

None detected

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_93424.6

Basepair signature

cWW-tSH-R-tHW-cWW

Number of instances in this motif group

26

Unit IDs

4NVV|1|A|A|1516
4NVV|1|A|G|1517
4NVV|1|A|A|1518
4NVV|1|A|A|1519
4NVV|1|A|G|1520
*
4NVV|1|A|U|1566
4NVV|1|A|G|1567
4NVV|1|A|G|1568
4NVV|1|A|U|1569

Current chains

Chain A

23S Ribosomal RNA

Nearby chains