IL_4NVV_099

3D structure

PDB id

4NVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUAGUAC*GGACCG

Length

13 nucleotides

Bulged bases

None detected

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49493.6

Basepair signature

cWW-tSH-tHH-cSH-tWH-tHS-cWW

Number of instances in this motif group

16

Unit IDs

4NVV|1|A|C|2664
4NVV|1|A|U|2665
4NVV|1|A|A|2666
4NVV|1|A|G|2667
4NVV|1|A|U|2668
4NVV|1|A|A|2669
4NVV|1|A|C|2670
*
4NVV|1|A|G|2675
4NVV|1|A|G|2676
4NVV|1|A|A|2677
4NVV|1|A|C|2678
4NVV|1|A|C|2679
4NVV|1|A|G|2680

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain H

50S Ribosomal Protein L6