IL_4NVV_105

3D structure

PDB id

4NVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGGG*CCGAC

Length

9 nucleotides

Bulged bases

None detected

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_54696.1

Basepair signature

cWW-L-R-R-cWS-cWW

Number of instances in this motif group

1

Unit IDs

4NVV|1|A|G|2853
4NVV|1|A|G|2854
4NVV|1|A|G|2855
4NVV|1|A|G|2856
*
4NVV|1|A|C|2880
4NVV|1|A|C|2881
4NVV|1|A|G|2882
4NVV|1|A|A|2883
4NVV|1|A|C|2884

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain E

50S Ribosomal Protein L3

Chain R

50S Ribosomal Protein L17

Chain T

50S Ribosomal Protein L19