3D structure

PDB id
4NXM (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of the 30S ribosomal subunit from a GidB (RsmG) mutant of Thermus thermophilus (HB8)
Experimental method
X-RAY DIFFRACTION
Resolution
3.65 Å

Loop

Sequence
GUUAGUUGCCAGCG*CGGGCACUCUAAC
Length
27 nucleotides
Bulged bases
4NXM|1|A|U|1125
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4NXM|1|A|G|1120
4NXM|1|A|U|1121
4NXM|1|A|U|1122
4NXM|1|A|A|1123
4NXM|1|A|G|1124
4NXM|1|A|U|1125
4NXM|1|A|U|1126
4NXM|1|A|G|1127
4NXM|1|A|C|1128
4NXM|1|A|C|1129
4NXM|1|A|A|1130
4NXM|1|A|G|1131
4NXM|1|A|C|1132
4NXM|1|A|G|1133
*
4NXM|1|A|C|1141
4NXM|1|A|G|1142
4NXM|1|A|G|1143
4NXM|1|A|G|1144
4NXM|1|A|C|1145
4NXM|1|A|A|1146
4NXM|1|A|C|1147
4NXM|1|A|U|1148
4NXM|1|A|C|1149
4NXM|1|A|U|1150
4NXM|1|A|A|1151
4NXM|1|A|A|1152
4NXM|1|A|C|1153

Current chains

Chain A
16S rRNA

Nearby chains

Chain I
ribosomal protein S9
Chain J
ribosomal protein S10

Coloring options:

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