IL_4NXN_049

3D structure

PDB id

4NXN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the 30S ribosomal subunit from a GidB (RsmG) mutant of Thermus thermophilus (HB8), bound with streptomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.54 Å

Loop

Sequence

UAGUUGC*GGCACUCUA

Length

16 nucleotides

Bulged bases

4NXN|1|A|U|1125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4NXN|1|A|U|1122
4NXN|1|A|A|1123
4NXN|1|A|G|1124
4NXN|1|A|U|1125
4NXN|1|A|U|1126
4NXN|1|A|G|1127
4NXN|1|A|C|1128
*
4NXN|1|A|G|1143
4NXN|1|A|G|1144
4NXN|1|A|C|1145
4NXN|1|A|A|1146
4NXN|1|A|C|1147
4NXN|1|A|U|1148
4NXN|1|A|C|1149
4NXN|1|A|U|1150
4NXN|1|A|A|1151

Current chains

Chain A

16S rRNA

Nearby chains

Chain I

ribosomal protein S9

Chain J

ribosomal protein S10