IL_4NXN_060
3D structure
- PDB id
- 4NXN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of the 30S ribosomal subunit from a GidB (RsmG) mutant of Thermus thermophilus (HB8), bound with streptomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.54 Å
Loop
- Sequence
- CGAAG*CGAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4NXN_060 not in the Motif Atlas
- Geometric match to IL_4LFB_062
- Geometric discrepancy: 0.0814
- The information below is about IL_4LFB_062
- Detailed Annotation
- UAA/GAN variation
- Broad Annotation
- UAA/GAN variation
- Motif group
- IL_77691.5
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
4NXN|1|A|C|1431
4NXN|1|A|G|1432
4NXN|1|A|A|1433
4NXN|1|A|A|1434
4NXN|1|A|G|1435
*
4NXN|1|A|C|1466
4NXN|1|A|G|1467
4NXN|1|A|A|1468
4NXN|1|A|G|1469
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain T
- ribosomal protein S20
Coloring options: