IL_4O41_004

3D structure

PDB id

4O41 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Amide linked RNA

Experimental method

X-RAY DIFFRACTION

Resolution

1.2 Å

Loop

Sequence

(URU)CG*(URU)CG

Length

6 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: URU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4O41_004 not in the Motif Atlas

Geometric match to IL_4O41_003

Geometric discrepancy: 0.0588

The information below is about IL_4O41_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_10796.1

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

1

Unit IDs

4O41|1|A|URU|106
4O41|1|A|C|108
4O41|1|A|G|109
*
4O41|1|B|URU|206||A
4O41|1|B|C|208
4O41|1|B|G|209

Current chains

Chain A

AMIDE LINKED RNA

Chain B

AMIDE LINKED RNA

Nearby chains

Chain C

AMIDE LINKED RNA

Chain D

AMIDE LINKED RNA