IL_4OX9_063

3D structure

PDB id

4OX9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the aminoglycoside resistance methyltransferase NpmA bound to the 30S ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GUUGCCAGC*GGGCACUC

Length

17 nucleotides

Bulged bases

4OX9|1|A|U|1125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4OX9|1|A|G|1124
4OX9|1|A|U|1125
4OX9|1|A|U|1126
4OX9|1|A|G|1127
4OX9|1|A|C|1128
4OX9|1|A|C|1129
4OX9|1|A|A|1130
4OX9|1|A|G|1131
4OX9|1|A|C|1132
*
4OX9|1|A|G|1142
4OX9|1|A|G|1143
4OX9|1|A|G|1144
4OX9|1|A|C|1145
4OX9|1|A|A|1146
4OX9|1|A|C|1147
4OX9|1|A|U|1148
4OX9|1|A|C|1149

Current chains

Chain A

16S rRNA

Nearby chains

Chain I

30S ribosomal protein S9

Chain J

30S ribosomal protein S10