IL_4P70_017

3D structure

PDB id

4P70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

GGAAGAAG*UGUAAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4P70_017 not in the Motif Atlas

Homologous match to IL_4LFB_017

Geometric discrepancy: 0.1335

The information below is about IL_4LFB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_62329.1

Basepair signature

cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW

Number of instances in this motif group

2

Unit IDs

4P70|1|QA|G|409
4P70|1|QA|G|410
4P70|1|QA|A|411
4P70|1|QA|A|412
4P70|1|QA|G|413
4P70|1|QA|A|414
4P70|1|QA|A|415
4P70|1|QA|G|416
*
4P70|1|QA|U|427
4P70|1|QA|G|428
4P70|1|QA|U|429
4P70|1|QA|A|430
4P70|1|QA|A|431
4P70|1|QA|A|432
4P70|1|QA|C|433

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QD

30S ribosomal protein S4