IL_4P70_042

3D structure

PDB id

4P70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

GUC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4P70_042 not in the Motif Atlas

Homologous match to IL_4LFB_047

Geometric discrepancy: 0.1768

The information below is about IL_4LFB_047

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_68118.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

27

Unit IDs

4P70|1|QA|G|1061
4P70|1|QA|U|1062
4P70|1|QA|C|1063
*
4P70|1|QA|G|1193
4P70|1|QA|U|1194
4P70|1|QA|C|1195

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QC

30S ribosomal protein S3

Chain QE

30S ribosomal protein S5

Chain QI

30S ribosomal protein S9

Chain QJ

30S ribosomal protein S10

Chain QN

30S ribosomal protein S14 type Z

Chain QX

mRNA