IL_4P70_087

3D structure

PDB id

4P70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

GGGG*CUACC

Length

9 nucleotides

Bulged bases

4P70|1|RA|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4P70_087 not in the Motif Atlas

Geometric match to IL_4V88_429

Geometric discrepancy: 0.3562

The information below is about IL_4V88_429

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_30621.4

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

66

Unit IDs

4P70|1|RA|G|879
4P70|1|RA|G|880
4P70|1|RA|G|881
4P70|1|RA|G|882
*
4P70|1|RA|C|894
4P70|1|RA|U|895
4P70|1|RA|A|896
4P70|1|RA|C|897
4P70|1|RA|C|898

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RZ

50S ribosomal protein L25