IL_4P70_351

3D structure

PDB id

4P70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

AGAAG*UGGU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4P70_351 not in the Motif Atlas

Homologous match to IL_9DFE_059

Geometric discrepancy: 0.1319

The information below is about IL_9DFE_059

Detailed Annotation

UAA/GAN variation

Broad Annotation

No text annotation

Motif group

IL_45790.1

Basepair signature

cWW-tSH-L-tHS-cWW

Number of instances in this motif group

11

Unit IDs

4P70|1|RA|A|1469
4P70|1|RA|G|1470
4P70|1|RA|A|1471
4P70|1|RA|A|1472
4P70|1|RA|G|1473
*
4P70|1|RA|U|1520
4P70|1|RA|G|1521
4P70|1|RA|G|1522
4P70|1|RA|U|1523

Current chains

Chain RA

23S rRNA

Nearby chains