IL_4PWD_001
3D structure
- PDB id
- 4PWD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of HIV-1 reverse transcriptase in complex with bulge-RNA/DNA and Nevirapine
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GAAAC*GTTC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4PWD|1|E|G|714
4PWD|1|E|A|715
4PWD|1|E|A|715|||A
4PWD|1|E|A|716
4PWD|1|E|C|717
*
4PWD|1|F|DG|811
4PWD|1|F|DT|812
4PWD|1|F|DT|813
4PWD|1|F|DC|814
Current chains
- Chain E
- 5'-R(*AP*UP*GP*GP*UP*CP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*AP*CP*AP*GP*GP*GP*AP*CP*UP*GP*U)-3'
- Chain F
- 5'-D(*A*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*GP*CP*GP*CP*CP*G)-3'
Nearby chains
- Chain C
- HIV-1 Reverse Transcriptase, P66 subunit
- Chain D
- HIV-1 Reverse Transcriptase, P51 subunit
Coloring options: