IL_4QVI_002

3D structure

PDB id

4QVI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of mutant ribosomal protein M218L TthL1 in complex with 80nt 23S RNA from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

1.9 Å

Loop

Sequence

GCGUAGGAUAG*CC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_07245.1

Basepair signature

cWW-tWH-L-L-L-cWW

Number of instances in this motif group

4

Unit IDs

4QVI|1|B|G|2110
4QVI|1|B|C|2111
4QVI|1|B|G|2112
4QVI|1|B|U|2113
4QVI|1|B|A|2114
4QVI|1|B|G|2115
4QVI|1|B|G|2116
4QVI|1|B|A|2117
4QVI|1|B|U|2118
4QVI|1|B|A|2119
4QVI|1|B|G|2120
*
4QVI|1|B|C|2178
4QVI|1|B|C|2179

Current chains

Chain B

fragment of 23S rRNA

Nearby chains

Chain A

50S ribosomal protein L1