IL_4RZD_001

3D structure

PDB id

4RZD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a PreQ1 Riboswitch

Experimental method

X-RAY DIFFRACTION

Resolution

2.75 Å

Loop

Sequence

CC*GCG

Length

5 nucleotides

Bulged bases

4RZD|1|A|C|79

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Single bulged C

Broad Annotation

No text annotation

Motif group

IL_61258.7

Basepair signature

cWW-cWW

Number of instances in this motif group

35

Unit IDs

4RZD|1|A|C|56
4RZD|1|A|C|57
*
4RZD|1|A|G|78
4RZD|1|A|C|79
4RZD|1|A|G|80

Current chains

Chain A

PreQ1-III Riboswitch (Class 3)

Nearby chains