IL_4TUC_218

3D structure

PDB id

4TUC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CC*GAG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUC_218 not in the Motif Atlas

Homologous match to IL_4LFB_053

Geometric discrepancy: 0.1271

The information below is about IL_4LFB_053

Detailed Annotation

Not an internal loop

Broad Annotation

Not an internal loop

Motif group

IL_80097.3

Basepair signature

cWW-tHS-cWW

Number of instances in this motif group

15

Unit IDs

4TUC|1|XA|C|1259
4TUC|1|XA|C|1260
*
4TUC|1|XA|G|1274
4TUC|1|XA|A|1275
4TUC|1|XA|G|1276

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XU

30S ribosomal protein Thx