3D structure

PDB id
4TUC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
GUC*GC
Length
5 nucleotides
Bulged bases
4TUC|1|YA|U|1012
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4TUC_267 not in the Motif Atlas
Homologous match to IL_7RQB_038
Geometric discrepancy: 0.1163
The information below is about IL_7RQB_038
Detailed Annotation
Single bulged U
Broad Annotation
No text annotation
Motif group
IL_83039.16
Basepair signature
cWW-L-cWW
Number of instances in this motif group
116

Unit IDs

4TUC|1|YA|G|1011
4TUC|1|YA|U|1012
4TUC|1|YA|C|1013
*
4TUC|1|YA|G|1149
4TUC|1|YA|C|1150

Current chains

Chain YA
23S rRNA

Nearby chains

Chain YN
50S ribosomal protein L13
Chain YU
50S ribosomal protein L20

Coloring options:


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