3D structure

PDB id
4TUC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
GGAG*CGCCGGUGAAAUAC
Length
18 nucleotides
Bulged bases
4TUC|1|YA|A|2126, 4TUC|1|YA|U|2167
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4TUC|1|YA|G|2124
4TUC|1|YA|G|2125
4TUC|1|YA|A|2126
4TUC|1|YA|G|2127
*
4TUC|1|YA|C|2161
4TUC|1|YA|G|2162
4TUC|1|YA|C|2163
4TUC|1|YA|C|2164
4TUC|1|YA|G|2165
4TUC|1|YA|G|2166
4TUC|1|YA|U|2167
4TUC|1|YA|G|2168
4TUC|1|YA|A|2169
4TUC|1|YA|A|2170
4TUC|1|YA|A|2171
4TUC|1|YA|U|2172
4TUC|1|YA|A|2173
4TUC|1|YA|C|2174

Current chains

Chain YA
23S rRNA

Nearby chains

Chain QA
Small subunit ribosomal RNA; SSU rRNA

Coloring options:

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