IL_4TUC_356

3D structure

PDB id

4TUC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

UGAC*GUACA

Length

9 nucleotides

Bulged bases

4TUC|1|XA|A|1394

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUC_356 not in the Motif Atlas

Geometric match to IL_5EW4_001

Geometric discrepancy: 0.3304

The information below is about IL_5EW4_001

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_76776.1

Basepair signature

cWW-cWW-L-R-cWW

Number of instances in this motif group

4

Unit IDs

4TUC|1|XA|U|921
4TUC|1|XA|G|922
4TUC|1|XA|A|923
4TUC|1|XA|C|924
*
4TUC|1|XA|G|1392
4TUC|1|XA|U|1393
4TUC|1|XA|A|1394
4TUC|1|XA|C|1395
4TUC|1|XA|A|1396

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XE

30S ribosomal protein S5