IL_4TUE_143

3D structure

PDB id

4TUE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-SufJ bound to Codon ACC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CUGUGAAC*GGGAG

Length

13 nucleotides

Bulged bases

4TUE|1|RA|U|2132, 4TUE|1|RA|G|2157

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUE_143 not in the Motif Atlas

Homologous match to IL_5J7L_330

Geometric discrepancy: 0.3539

The information below is about IL_5J7L_330

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_70923.9

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

27

Unit IDs

4TUE|1|RA|C|2129
4TUE|1|RA|U|2130
4TUE|1|RA|G|2131
4TUE|1|RA|U|2132
4TUE|1|RA|G|2133
4TUE|1|RA|A|2134
4TUE|1|RA|A|2135
4TUE|1|RA|C|2136
*
4TUE|1|RA|G|2155
4TUE|1|RA|G|2156
4TUE|1|RA|G|2157
4TUE|1|RA|A|2158
4TUE|1|RA|G|2159

Current chains

Chain RA

23S rRNA

Nearby chains