IL_4TUE_187

3D structure

PDB id

4TUE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-SufJ bound to Codon ACC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GGAAGAAG*UGUAAAC

Length

15 nucleotides

Bulged bases

4TUE|1|XA|A|412

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUE_187 not in the Motif Atlas

Homologous match to IL_4LFB_017

Geometric discrepancy: 0.0975

The information below is about IL_4LFB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_62329.1

Basepair signature

cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW

Number of instances in this motif group

2

Unit IDs

4TUE|1|XA|G|409
4TUE|1|XA|G|410
4TUE|1|XA|A|411
4TUE|1|XA|A|412
4TUE|1|XA|G|413
4TUE|1|XA|A|414
4TUE|1|XA|A|415
4TUE|1|XA|G|416
*
4TUE|1|XA|U|427
4TUE|1|XA|G|428
4TUE|1|XA|U|429
4TUE|1|XA|A|430
4TUE|1|XA|A|431
4TUE|1|XA|A|432
4TUE|1|XA|C|433

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XD

30S ribosomal protein S4