IL_4TZZ_018
3D structure
- PDB id
- 4TZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Co-crystals of the Ternary Complex Containing a T-box Stem I RNA, its Cognate tRNAGly, and B. subtilis YbxF protein, treated by removing lithium sulfate and increasing PEG3350 concentration from 20% to 45% post crystallization
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.64 Å
Loop
- Sequence
- GAUU*AC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4TZZ_018 not in the Motif Atlas
- Geometric match to IL_4LCK_008
- Geometric discrepancy: 0.2438
- The information below is about IL_4LCK_008
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_79895.1
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
4TZZ|1|L|G|28
4TZZ|1|L|A|29
4TZZ|1|L|U|30
4TZZ|1|L|U|31
*
4TZZ|1|L|A|77
4TZZ|1|L|C|78
Current chains
- Chain L
- T-box Stem I RNA
Nearby chains
- Chain K
- Transfer RNA; tRNA
Coloring options: