3D structure

PDB id
4U1V (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the E. coli ribosome bound to linopristin.
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
UGAUA*UGUUUG
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4U1V|1|BA|U|2457
4U1V|1|BA|G|2458
4U1V|1|BA|A|2459
4U1V|1|BA|U|2460
4U1V|1|BA|A|2461
*
4U1V|1|BA|U|2489
4U1V|1|BA|G|2490
4U1V|1|BA|U|2491
4U1V|1|BA|U|2492
4U1V|1|BA|U|2493
4U1V|1|BA|G|2494

Current chains

Chain BA
23S rRNA

Nearby chains

Chain BM
50S ribosomal protein L16

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1492 s