IL_4U1V_168

3D structure

PDB id

4U1V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CU*AAG

Length

5 nucleotides

Bulged bases

4U1V|1|BA|A|2800

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4U1V_168 not in the Motif Atlas

Geometric match to IL_4WF9_022

Geometric discrepancy: 0.1822

The information below is about IL_4WF9_022

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

130

Unit IDs

4U1V|1|BA|C|2795
4U1V|1|BA|U|2796
*
4U1V|1|BA|A|2799
4U1V|1|BA|A|2800
4U1V|1|BA|G|2801

Current chains

Chain BA

23S rRNA

Nearby chains