IL_4U1V_199
3D structure
- PDB id
- 4U1V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to linopristin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GGAGG*CGUUAC
- Length
- 11 nucleotides
- Bulged bases
- 4U1V|1|CA|U|485
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U1V_199 not in the Motif Atlas
- Homologous match to IL_5J7L_022
- Geometric discrepancy: 0.1014
- The information below is about IL_5J7L_022
- Detailed Annotation
- tSH-tHW-tWW
- Broad Annotation
- No text annotation
- Motif group
- IL_88269.4
- Basepair signature
- cWW-tWW-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 3
Unit IDs
4U1V|1|CA|G|446
4U1V|1|CA|G|447
4U1V|1|CA|A|448
4U1V|1|CA|G|449
4U1V|1|CA|G|450
*
4U1V|1|CA|C|483
4U1V|1|CA|G|484
4U1V|1|CA|U|485
4U1V|1|CA|U|486
4U1V|1|CA|A|487
4U1V|1|CA|C|488
Current chains
- Chain CA
- 16S rRNA
Nearby chains
- Chain BH
- 50S ribosomal protein L9
- Chain CD
- 30S ribosomal protein S4
- Chain CP
- 30S ribosomal protein S16
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