IL_4U1V_235
3D structure
- PDB id
- 4U1V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to linopristin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U1V_235 not in the Motif Atlas
- Geometric match to IL_4V88_465
- Geometric discrepancy: 0.1621
- The information below is about IL_4V88_465
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
4U1V|1|CA|G|1405
4U1V|1|CA|U|1406
4U1V|1|CA|C|1407
*
4U1V|1|CA|G|1494
4U1V|1|CA|U|1495
4U1V|1|CA|C|1496
Current chains
- Chain CA
- 16S rRNA
Nearby chains
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: