IL_4U1V_259

3D structure

PDB id

4U1V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UU*GGA

Length

5 nucleotides

Bulged bases

4U1V|1|DA|G|729

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4U1V_259 not in the Motif Atlas

Homologous match to IL_4WF9_023

Geometric discrepancy: 0.1005

The information below is about IL_4WF9_023

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.13

Basepair signature

cWW-L-cWW

Number of instances in this motif group

49

Unit IDs

4U1V|1|DA|U|702
4U1V|1|DA|U|703
*
4U1V|1|DA|G|728
4U1V|1|DA|G|729
4U1V|1|DA|A|730

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DC

50S ribosomal protein L2